miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|92448037|gb|EB519451.1|EB519451 GAATTACAAAATTAAAGAAAGGAATGCTTTAAATTTTTGTACTTTGCTGAAAATTCTTTTTCCCAGGGTCTATAAAACAT
TAATTTGTTTTTATATTTTACTATTTTTTTGTGTTTTTTTTTTTTGTTTTTAAATCAATAAGTAATCTAGGACTAGCATT
ATGTTTGCTAGACCTGGCATTTGCTCGGTACATAAGGTTCAAAGTTTCCTTTCCTTTTTTTATTTATTTTATATTTTGCA
ATGTTTTTTTTCCATAATATTTAAGTTTTTCGATGTTTAGATATTTTTCTTCGGTGAAGCACAATTTTCTTTTCGTGGTC
CCTGATCAATTTTAAACAGTTGGAACACCGGTGGCACTGTTAACTGCTTTCTGGGCAGCCTCTTTAGCTTGGTGGGCTTG
TAGTACAGCTACAGCTTCATCAAACTTAGAACGGAGTGACTCAGGAGACTCGAGCATATGAAGAAGTTCTGAATTATCAA
TTCTCCAACAACATGCCAGTGATTTTACCAGCAAGAGTAGGGTGCATGGCTTGAATAAAAGGAAACAGCCGTTCACCCAA
CATTTGCTTTTGCTCTTGAGGAGGGGCAGATGCCAACATGGAAACAGTCAAAGTTCCTGACCTTGTACATGAACAGCAGG
CTGTTGCATTTGTAACTTGTGGCTGTGCATTAAGATGTTGCTGAGGATTGCGAACTCCTGCACCATATTATACTGGTGGA
CGGTGCGGACAGCAGGAGTATGCTGCTGCAGCTGCAGCTGCAGGACTGTGACTCATTGTCTGTGTGATGTGTTAG




Most similar to sp|Q5R8F7|PABP1_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo
           abelii GN=PABPC1 PE=2 SV=1
          Length = 636

 Score =  118 bits (295), Expect = 5e-26
 Identities = 66/101 (65%), Positives = 66/101 (65%)
 Frame = -2

Query: 785 TQTMSHSPXXXXXXAYSCCPHRPPV*YGAGVRNPQQHLNAQPQVTNATACCSCTRSGTLT 606
           TQTM   P      A       P   Y AGVRNPQQHLNAQPQVT             LT
Sbjct: 487 TQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLT 546

Query: 605 VSMLASAPPQEQKQMLGERLFPFIQAMHPTLAGKITGMLLE 483
            SMLASAPPQEQKQMLGERLFP IQAMHPTLAGKITGMLLE
Sbjct: 547 ASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLE 587